BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D12LP1|AL429903
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1329 1648 0.0
>3x_Contig1329
Length = 7405
Score = 1648 bits (830), Expect = 0.0
Identities = 841/846 (99%)
Strand = Plus / Minus
Query: 18 agacgaaatctgatcataatatatggtttatgacctgtttaatgcagtaaacacattcac 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3616 agacgaaatctgatcataatatatggtttatgacctgtttaatgcagtaaacacattcac 3557
Query: 78 cgaaataaacagttaggtgccttctggttatggttacgaatggattttaagtaagcaatc 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3556 cgaaataaacagttaggtgccttctggttatggttacgaatggattttaagtaagcaatc 3497
Query: 138 aaacttaatatgcsaacttccacgttagctaaaggtgctacctcggatttaggcgttgga 197
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3496 aaacttaatatgccaacttccacgttagctaaaggtgctacctcggatttaggcgttgga 3437
Query: 198 aatgtatattctaaagagaactcaaatgtaaacagcggatctaaaggcaatttgtcacgt 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3436 aatgtatattctaaagagaactcaaatgtaaacagcggatctaaaggcaatttgtcacgt 3377
Query: 258 gatagtatcatttccgaggtgttggacaaggtatttgaggstgatagagtgatttaatta 317
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 3376 gatagtatcatttccgaggtgttggacaaggtatttgaggctgatagagtgattcaatta 3317
Query: 318 accatattggggcttagttcgcatctagtgtatgcgaagtatggttcggaaccatggttc 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3316 accatattggggcttagttcgcatctagtgtatgcgaagtatggttcggaaccatggttc 3257
Query: 378 tcgcagcaattttctatggtcacgtcagttttgatggcatatgttgttaatttatggatg 437
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3256 tcgcagcaattttctatggtcacgtcagtattgatggcatatgttgttaatttatggatg 3197
Query: 438 tctgcgaccaggactaatttgggagttaacactcttccaacattcaatacgatatattta 497
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3196 tctgcgaccaggactaatttgggagtcaacactcttccaacattcaatacgatatattta 3137
Query: 498 ttttacatgcagttgctactttctacactatttgtgccacaatatctactgctgaatacc 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3136 ttttacatgcagttgctactttctacactatttgtgccacaatatctactgctgaatacc 3077
Query: 558 gttttggccttttccattagtgatatatctgtctttttcaagatcccattgcagataata 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3076 gttttggccttttccattagtgatatatctgtctttttcaagatcccattgcagataata 3017
Query: 618 tttcttctgatgggagacgacggatctgctaacattgccaacgatgttaaggcattggtt 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3016 tttcttctgatgggagacgacggatctgctaacattgccaacgatgttaaggcattggtt 2957
Query: 678 ttgaattatttcttcatatttggtctttataagacttccaaattgaaatctttagacaag 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2956 ttgaattatttcttcatatttggtctttataagacttccaaattgaaatctttagacaag 2897
Query: 738 accgagtgtcatatgttcgctcttctttgcactgatattttggccctcgttgagtctgac 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 accgagtgtcatatgttcgctcttctttgcactgatattttggccctcgttgagtctgac 2837
Query: 798 tctatttatttccaagttttccaagtatgctttacaagttttatcgtcttggtaactgtc 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2836 tctatttatttccaagttttccaagtatgctttacaagttttatcgtcttggtaactgtc 2777
Query: 858 acttcc 863
||||||
Sbjct: 2776 acttcc 2771
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6203
Number of Sequences: 1807
Number of extensions: 6203
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)